Nature Physics

Sequence-specific interactions determine viscoelasticity and aging dynamics of protein condensates
Alshareedah I, Borcherds WM, Cohen SR, Singh A, Posey AE, Farag M, Bremer A, Strout GW, Tomares DT, Pappu RV, Mittag T and Banerjee PR
Biomolecular condensates are viscoelastic materials. Here, we investigate the determinants of sequence-encoded and age-dependent viscoelasticity of condensates formed by the prion-like low-complexity domain of the protein hnRNP A1 and its designed variants. We find that the dominantly viscous forms of the condensates are metastable Maxwell fluids. A Rouse-Zimm model that accounts for the network-like organization of proteins within condensates reproduces the measured viscoelastic moduli. We show that the strengths of aromatic inter-sticker interactions determine sequence-specific amplitudes of elastic and viscous moduli, and the timescales over which elastic properties dominate. These condensates undergo physical ageing on sequence-specific timescales. This is driven by mutations to spacer residues that weaken the metastability of dominantly viscous phases. The ageing of condensates is accompanied by disorder-to-order transitions, leading to the formation of non-fibrillar, beta-sheet-containing, semi-crystalline, elastic, Kelvin-Voigt solids. Our results suggest that sequence grammars, which refer to amino acid identities of stickers versus spacers in prion-like low-complexity domains, have evolved to afford control over metastabilities of dominantly viscous fluid phases of condensates. This selection is likely to render barriers for conversion from metastable fluids to globally stable solids insurmountable on functionally relevant timescales.
Biofilms as self-shaping growing nematics
Nijjer J, Li C, Kothari M, Henzel T, Zhang Q, Tai JB, Zhou S, Cohen T, Zhang S and Yan J
Active nematics are the nonequilibrium analogue of passive liquid crystals. They consist of anisotropic units that consume free energy to drive emergent behaviour. Like liquid crystal molecules in displays, ordering and dynamics in active nematics are sensitive to boundary conditions. However, unlike passive liquid crystals, active nematics have the potential to regulate their boundaries through self-generated stresses. Here, we show how a three-dimensional, living nematic can actively shape itself and its boundary to regulate its internal architecture through growth-induced stresses, using bacterial biofilms confined by a hydrogel as a model system. We show that biofilms exhibit a sharp transition in shape from domes to lenses upon changing environmental stiffness or cell-substrate friction, which is explained by a theoretical model that considers the competition between confinement and interfacial forces. The growth mode defines the progression of the boundary, which in turn determines the trajectories and spatial distribution of cell lineages. We further demonstrate that the evolving boundary and corresponding stress anisotropy define the orientational ordering of cells and the emergence of topological defects in the biofilm interior. Our findings may provide strategies for the development of programmed microbial consortia with emergent material properties.
Scaling behaviour and control of nuclear wrinkling
Jackson JA, Romeo N, Mietke A, Burns KJ, Totz JF, Martin AC, Dunkel J and Alsous JI
The cell nucleus is enveloped by a complex membrane, whose wrinkling has been implicated in disease and cellular aging. The biophysical dynamics and spectral evolution of nuclear wrinkling during multicellular development remain poorly understood due to a lack of direct quantitative measurements. Here, we characterize the onset and dynamics of nuclear wrinkling during egg development in the fruit fly when nurse cell nuclei increase in size and display stereotypical wrinkling behavior. A spectral analysis of three-dimensional high-resolution live imaging data from several hundred nuclei reveals a robust asymptotic power-law scaling of angular fluctuations consistent with renormalization and scaling predictions from a nonlinear elastic shell model. We further demonstrate that nuclear wrinkling can be reversed through osmotic shock and suppressed by microtubule disruption, providing tuneable physical and biological control parameters for probing mechanical properties of the nuclear envelope. Our findings advance the biophysical understanding of nuclear membrane fluctuations during early multicellular development.
Cavity-mediated long-range interactions in levitated optomechanics
Vijayan J, Piotrowski J, Gonzalez-Ballestero C, Weber K, Romero-Isart O and Novotny L
The ability to engineer cavity-mediated interactions has emerged as a powerful tool for the generation of non-local correlations and the investigation of non-equilibrium phenomena in many-body systems. Levitated optomechanical systems have recently entered the multiparticle regime, which promises the use of arrays of strongly coupled massive oscillators to explore complex interacting systems and sensing. Here we demonstrate programmable cavity-mediated interactions between nanoparticles in vacuum by combining advances in multiparticle optical levitation and cavity-based quantum control. The interaction is mediated by photons scattered by spatially separated particles in a cavity, resulting in strong coupling that is long-range in nature. We investigate the scaling of the interaction strength with cavity detuning and interparticle separation and demonstrate the tunability of interactions between different mechanical modes. Our work will enable the exploration of many-body effects in nanoparticle arrays with programmable cavity-mediated interactions, generating entanglement of motion, and the use of interacting particle arrays for optomechanical sensing.
Observation of Josephson harmonics in tunnel junctions
Willsch D, Rieger D, Winkel P, Willsch M, Dickel C, Krause J, Ando Y, Lescanne R, Leghtas Z, Bronn NT, Deb P, Lanes O, Minev ZK, Dennig B, Geisert S, Günzler S, Ihssen S, Paluch P, Reisinger T, Hanna R, Bae JH, Schüffelgen P, Grützmacher D, Buimaga-Iarinca L, Morari C, Wernsdorfer W, DiVincenzo DP, Michielsen K, Catelani G and Pop IM
Approaches to developing large-scale superconducting quantum processors must cope with the numerous microscopic degrees of freedom that are ubiquitous in solid-state devices. State-of-the-art superconducting qubits employ aluminium oxide (AlO) tunnel Josephson junctions as the sources of nonlinearity necessary to perform quantum operations. Analyses of these junctions typically assume an idealized, purely sinusoidal current-phase relation. However, this relation is expected to hold only in the limit of vanishingly low-transparency channels in the AlO barrier. Here we show that the standard current-phase relation fails to accurately describe the energy spectra of transmon artificial atoms across various samples and laboratories. Instead, a mesoscopic model of tunnelling through an inhomogeneous AlO barrier predicts percent-level contributions from higher Josephson harmonics. By including these in the transmon Hamiltonian, we obtain orders of magnitude better agreement between the computed and measured energy spectra. The presence and impact of Josephson harmonics has important implications for developing AlO-based quantum technologies including quantum computers and parametric amplifiers. As an example, we show that engineered Josephson harmonics can reduce the charge dispersion and associated errors in transmon qubits by an order of magnitude while preserving their anharmonicity.
Demonstration and imaging of cryogenic magneto-thermoelectric cooling in a van der Waals semimetal
Völkl T, Aharon-Steinberg A, Holder T, Alpern E, Banu N, Pariari AK, Myasoedov Y, Huber ME, Hücker M and Zeldov E
Attaining viable thermoelectric cooling at cryogenic temperatures is of considerable fundamental and technological interest for electronics and quantum materials applications. In-device temperature control can provide more efficient and precise thermal environment management compared with conventional global cooling. The application of a current and perpendicular magnetic field gives rise to cooling by generating electron-hole pairs on one side of the sample and to heating due to their recombination on the opposite side, which is known as the Ettingshausen effect. Here we develop nanoscale cryogenic imaging of the magneto-thermoelectric effect and demonstrate absolute cooling and an Ettingshausen effect in exfoliated WTe Weyl semimetal flakes at liquid He temperatures. In contrast to bulk materials, the cooling is non-monotonic with respect to the magnetic field and device size. Our model of magneto-thermoelectricity in mesoscopic semimetal devices shows that the cooling efficiency and the induced temperature profiles are governed by the interplay between sample geometry, electron-hole recombination length, magnetic field, and flake and substrate heat conductivities. The observations open the way for the direct integration of microscopic thermoelectric cooling and for temperature landscape engineering in van der Waals devices.
Irreversible entropy transport enhanced by fermionic superfluidity
Fabritius P, Mohan J, Talebi M, Wili S, Zwerger W, Huang MZ and Esslinger T
The nature of particle and entropy flow between two superfluids is often understood in terms of reversible flow carried by an entropy-free, macroscopic wavefunction. While this wavefunction is responsible for many intriguing properties of superfluids and superconductors, its interplay with excitations in non-equilibrium situations is less understood. Here we observe large concurrent flows of both particles and entropy through a ballistic channel connecting two strongly interacting fermionic superfluids. Both currents respond nonlinearly to chemical potential and temperature biases. We find that the entropy transported per particle is much larger than the prediction of superfluid hydrodynamics in the linear regime and largely independent of changes in the channel's geometry. By contrast, the timescales of advective and diffusive entropy transport vary significantly with the channel geometry. In our setting, superfluidity counterintuitively increases the speed of entropy transport. Moreover, we develop a phenomenological model describing the nonlinear dynamics within the framework of generalized gradient dynamics. Our approach for measuring entropy currents may help elucidate mechanisms of heat transfer in superfluids and superconducting devices.
Complexity of crack front geometry enhances toughness of brittle solids
Wei X, Li C, McCarthy C and Kolinski JM
Brittle solids typically fail by growth and propagation of a crack from a surface flaw. This process is modelled using linear elastic fracture mechanics, which parameterizes the toughness of a material by the critical stress intensity factor, or the prefactor of the singular stress field. This widely used theory applies for cracks that are planar, but cracks typically are not planar, and instead are geometrically complex, violating core tenets of linear elastic fracture mechanics. Here we characterize the crack tip kinematics of complex crack fronts in three dimensions using optical microscopy of several transparent, brittle materials, including hydrogels of four different chemistries and an elastomer. We find that the critical strain energy required to drive the crack is directly proportional to the geodesic length of the crack, which makes the sample effectively tougher. The connection between crack front geometry and toughness has repercussions for the theoretical modelling of three-dimensional cracks, from engineering testing of materials to ab-initio development of novel materials, and highlights an important gap in the current theory for three-dimensional cracks.
Correlated order at the tipping point in the kagome metal CsVSb
Guo C, Wagner G, Putzke C, Chen D, Wang K, Zhang L, Gutierrez-Amigo M, Errea I, Vergniory MG, Felser C, Fischer MH, Neupert T and Moll PJW
Spontaneously broken symmetries are at the heart of many phenomena of quantum matter and physics more generally. However, determining the exact symmetries that are broken can be challenging due to imperfections such as strain, in particular when multiple electronic orders are competing. This is exemplified by charge order in some kagome systems, where evidence of nematicity and flux order from orbital currents remains inconclusive due to contradictory measurements. Here we clarify this controversy by fabricating highly symmetric samples of a member of this family, CsVSb, and measuring their transport properties. We find that a measurable anisotropy is absent at any temperature in the unperturbed material. However, a pronounced in-plane transport anisotropy appears when either weak magnetic fields or strains are present. A symmetry analysis indicates that a perpendicular magnetic field can indeed lead to in-plane anisotropy by inducing a flux order coexisting with more conventional bond order. Our results provide a unifying picture for the controversial charge order in kagome metals and highlight the need for materials control at the microscopic scale in the identification of broken symmetries.
Exponentially tighter bounds on limitations of quantum error mitigation
Quek Y, Stilck França D, Khatri S, Meyer JJ and Eisert J
Quantum error mitigation has been proposed as a means to combat unwanted and unavoidable errors in near-term quantum computing without the heavy resource overheads required by fault-tolerant schemes. Recently, error mitigation has been successfully applied to reduce noise in near-term applications. In this work, however, we identify strong limitations to the degree to which quantum noise can be effectively 'undone' for larger system sizes. Our framework rigorously captures large classes of error-mitigation schemes in use today. By relating error mitigation to a statistical inference problem, we show that even at shallow circuit depths comparable to those of current experiments, a superpolynomial number of samples is needed in the worst case to estimate the expectation values of noiseless observables, the principal task of error mitigation. Notably, our construction implies that scrambling due to noise can kick in at exponentially smaller depths than previously thought. Noise also impacts other near-term applications by constraining kernel estimation in quantum machine learning, causing an earlier emergence of noise-induced barren plateaus in variational quantum algorithms and ruling out exponential quantum speed-ups in estimating expectation values in the presence of noise or preparing the ground state of a Hamiltonian.
Empowering deep neural quantum states through efficient optimization
Chen A and Heyl M
Computing the ground state of interacting quantum matter is a long-standing challenge, especially for complex two-dimensional systems. Recent developments have highlighted the potential of neural quantum states to solve the quantum many-body problem by encoding the many-body wavefunction into artificial neural networks. However, this method has faced the critical limitation that existing optimization algorithms are not suitable for training modern large-scale deep network architectures. Here, we introduce a minimum-step stochastic-reconfiguration optimization algorithm, which allows us to train deep neural quantum states with up to 10 parameters. We demonstrate our method for paradigmatic frustrated spin-1/2 models on square and triangular lattices, for which our trained deep networks approach machine precision and yield improved variational energies compared to existing results. Equipped with our optimization algorithm, we find numerical evidence for gapless quantum-spin-liquid phases in the considered models, an open question to date. We present a method that captures the emergent complexity in quantum many-body problems through the expressive power of large-scale artificial neural networks.
Wave-momentum shaping for moving objects in heterogeneous and dynamic media
Orazbayev B, Malléjac M, Bachelard N, Rotter S and Fleury R
Light and sound waves can move objects through the transfer of linear or angular momentum, which has led to the development of optical and acoustic tweezers, with applications ranging from biomedical engineering to quantum optics. Although impressive manipulation results have been achieved, the stringent requirement for a highly controlled, low-reverberant and static environment still hinders the applicability of these techniques in many scenarios. Here we overcome this challenge and demonstrate the manipulation of objects in disordered and dynamic media by optimally tailoring the momentum of sound waves iteratively in the far field. The method does not require information about the object's physical properties or the spatial structure of the surrounding medium but relies only on a real-time scattering matrix measurement and a positional guide-star. Our experiment demonstrates the possibility of optimally moving and rotating objects to extend the reach of wave-based object manipulation to complex and dynamic scattering media. We envision new opportunities for biomedical applications, sensing and manufacturing.
Terahertz spectroscopy of collective charge density wave dynamics at the atomic scale
Sheng S, Abdo M, Rolf-Pissarczyk S, Lichtenberg K, Baumann S, Burgess JAJ, Malavolti L and Loth S
Charge density waves are wave-like modulations of a material's electron density that display collective amplitude and phase dynamics. The interaction with atomic impurities induces strong spatial heterogeneity of the charge-ordered phase. Direct real-space observation of phase excitation dynamics of such defect-induced charge modulation is absent. Here, by utilizing terahertz pump-probe spectroscopy in a scanning tunnelling microscope, we measure the ultrafast collective dynamics of the charge density wave in the transition metal dichalcogenide 2H-NbSe with atomic spatial resolution. The tip-enhanced electric field of the terahertz pulses excites oscillations of the charge density wave that vary in magnitude and frequency on the scale of individual atomic impurities. Overlapping phase excitations originating from the randomly distributed atomic defects in the surface create this spatially structured response of the charge density wave. This ability to observe collective charge order dynamics with local probes makes it possible to study the dynamics of correlated materials at the intrinsic length scale of their underlying interactions.
Self-organization of mortal filaments and its role in bacterial division ring formation
Vanhille-Campos C, Whitley KD, Radler P, Loose M, Holden S and Šarić A
Filaments in the cell commonly treadmill. Driven by energy consumption, they grow on one end while shrinking on the other, causing filaments to appear motile even though individual proteins remain static. This process is characteristic of cytoskeletal filaments and leads to collective filament self-organization. Here we show that treadmilling drives filament nematic ordering by dissolving misaligned filaments. Taking the bacterial FtsZ protein involved in cell division as an example, we show that this mechanism aligns FtsZ filaments in vitro and drives the organization of the division ring in living cells. We find that ordering via local dissolution also allows the system to quickly respond to chemical and geometrical biases in the cell, enabling us to quantitatively explain the ring formation dynamics in vivo. Beyond FtsZ and other cytoskeletal filaments, our study identifies a mechanism for self-organization via constant birth and death of energy-consuming filaments.
Circuit quantum electrodynamics detection of induced two-fold anisotropic pairing in a hybrid superconductor-ferromagnet bilayer
Bøttcher CGL, Poniatowski NR, Grankin A, Wesson ME, Yan Z, Vool U, Galitski VM and Yacoby A
Hybrid systems represent one of the frontiers in the study of unconventional superconductivity and are a promising platform to realize topological superconducting states. These materials are challenging to probe using many conventional measurement techniques because of their mesoscopic dimensions, and therefore require new experimental probes so that they can be successfully characterized. Here, we demonstrate a probe that enables us to measure the superfluid density of micrometre-size superconductors using microwave techniques drawn from circuit quantum electrodynamics. We apply this technique to a superconductor-ferromagnet bilayer and find that the proximity-induced superfluid density is two-fold anisotropic within the plane of the sample. It also exhibits power-law temperature scaling that is indicative of a nodal superconducting state. These experimental results are consistent with the theoretically predicted signatures of induced triplet pairing with a nodal -wave order parameter. Moreover, we observe modifications to the microwave response at frequencies near the ferromagnetic resonance, suggesting a coupling between the spin dynamics and induced superconducting order in the ferromagnetic layer. Our experimental technique can be employed more widely, for example to study fragile unconventional superconductivity in low-dimensional materials such as van der Waals heterostructures.
Engineering multimode interactions in circuit quantum acoustodynamics
von Lüpke U, Rodrigues IC, Yang Y, Fadel M and Chu Y
In recent years, important progress has been made towards encoding and processing quantum information in the large Hilbert space of bosonic modes. Mechanical resonators have several practical advantages for this purpose, because they confine many high-quality-factor modes into a small volume and can be easily integrated with different quantum systems. However, it is challenging to create direct interactions between different mechanical modes that can be used to emulate quantum gates. Here we demonstrate an in situ tunable beamsplitter-type interaction between several mechanical modes of a high-overtone bulk acoustic-wave resonator. The engineered interaction is mediated by a parametrically driven superconducting transmon qubit, and we show that it can be tailored to couple pairs or triplets of phononic modes. Furthermore, we use this interaction to demonstrate the Hong-Ou-Mandel effect between phonons. Our results lay the foundations for using phononic systems as quantum memories and platforms for quantum simulations.
Non-Hermitian dynamics and non-reciprocity of optically coupled nanoparticles
Reisenbauer M, Rudolph H, Egyed L, Hornberger K, Zasedatelev AV, Abuzarli M, Stickler BA and Delić U
Non-Hermitian dynamics, as observed in photonic, atomic, electrical and optomechanical platforms, holds great potential for sensing applications and signal processing. Recently, fully tuneable non-reciprocal optical interaction has been demonstrated between levitated nanoparticles. Here we use this tunability to investigate the collective non-Hermitian dynamics of two non-reciprocally and nonlinearly interacting nanoparticles. We observe parity-time symmetry breaking and, for sufficiently strong coupling, a collective mechanical lasing transition in which the particles move along stable limit cycles. This work opens up a research avenue of non-equilibrium multi-particle collective effects, tailored by the dynamic control of individual sites in a tweezer array.
Propagation of extended fractures by local nucleation and rapid transverse expansion of crack-front distortion
Cochard T, Svetlizky I, Albertini G, Viesca RC, Rubinstein SM, Spaepen F, Yuan C, Denolle M, Song YQ, Xiao L and Weitz DA
Fractures are ubiquitous and can lead to the catastrophic material failure of materials. Although fracturing in a two-dimensional plane is well understood, all fractures are extended in and propagate through three-dimensional space. Moreover, their behaviour is complex. Here we show that the forward propagation of a fracture front occurs through an initial rupture, nucleated at some localized position, followed by a very rapid transverse expansion at velocities as high as the Rayleigh-wave speed. We study fracturing in a circular geometry that achieves an uninterrupted extended fracture front and use a fluid to control the loading conditions that determine the amplitude of the forward jump. We find that this amplitude correlates with the transverse velocity. Dynamic rupture simulations capture the observations for only a high transverse velocity. These results highlight the importance of transverse dynamics in the forward propagation of an extended fracture.
Induced superconducting correlations in a quantum anomalous Hall insulator
Uday A, Lippertz G, Moors K, Legg HF, Joris R, Bliesener A, Pereira LMC, Taskin AA and Ando Y
Thin films of ferromagnetic topological insulator materials can host the quantum anomalous Hall effect without the need for an external magnetic field. Inducing Cooper pairing in such a material is a promising way to realize topological superconductivity with the associated chiral Majorana edge states. However, finding evidence of the superconducting proximity effect in such a state has remained a considerable challenge due to inherent experimental difficulties. Here we demonstrate crossed Andreev reflection across a narrow superconducting Nb electrode that is in contact with the chiral edge state of a quantum anomalous Hall insulator. In the crossed Andreev reflection process, an electron injected from one terminal is reflected out as a hole at the other terminal to form a Cooper pair in the superconductor. This is a compelling signature of induced superconducting pair correlation in the chiral edge state. The characteristic length of the crossed Andreev reflection process is found to be much longer than the superconducting coherence length in Nb, which suggests that the crossed Andreev reflection is, indeed, mediated by superconductivity induced on the quantum anomalous Hall insulator surface. Our results will invite future studies of topological superconductivity and Majorana physics, as well as for the search for non-abelian zero modes.
Dipolar skyrmions and antiskyrmions of arbitrary topological charge at room temperature
Hassan M, Koraltan S, Ullrich A, Bruckner F, Serha RO, Levchenko KV, Varvaro G, Kiselev NS, Heigl M, Abert C, Suess D and Albrecht M
Magnetic skyrmions are localized, stable topological magnetic textures that can move and interact with each other like ordinary particles when an external stimulus is applied. The efficient control of the motion of spin textures using spin-polarized currents opened an opportunity for skyrmionic devices such as racetrack memory and neuromorphic or reservoir computing. The coexistence of skyrmions with high topological charge in the same system promises further possibilities for efficient technological applications. In this work, we directly observe dipolar skyrmions and antiskyrmions with arbitrary topological charge in Co/Ni multilayers at room temperature. We explore the dipolar-stabilized spin objects with topological charges of up to 10 and characterize their nucleation process, their energy dependence on the topological charge and the effect of the material parameters on their stability. Furthermore, our micromagnetic simulations demonstrate spin-transfer-induced motion of these spin objects, which is important for their potential device application.
Structural anisotropy results in mechano-directional transport of proteins across nuclear pores
Panagaki F, Tapia-Rojo R, Zhu T, Milmoe N, Paracuellos P, Board S, Mora M, Walker J, Rostkova E, Stannard A, Infante E and Garcia-Manyes S
The nuclear pore complex regulates nucleocytoplasmic transport by means of a tightly synchronized suite of biochemical reactions. The physicochemical properties of the translocating cargos are emerging as master regulators of their shuttling dynamics. As well as being affected by molecular weight and surface-exposed amino acids, the kinetics of the nuclear translocation of protein cargos also depend on their nanomechanical properties, yet the mechanisms underpinning the mechanoselectivity of the nuclear pore complex are unclear. Here we show that proteins with locally soft regions in the vicinity of the nuclear-localization sequence exhibit higher nuclear-import rates, and that such mechanoselectivity is specifically impaired upon knocking down nucleoporin 153, a key protein in the nuclear pore complex. This allows us to design a short, easy-to-express and chemically inert unstructured peptide tag that accelerates the nuclear-import rate of stiff protein cargos. We also show that U2OS osteosarcoma cells expressing the peptide-tagged myocardin-related transcription factor import this mechanosensitive protein to the nucleus at higher rates and display faster motility. Locally unstructured regions lower the free-energy barrier of protein translocation and might offer a control mechanism for nuclear mechanotransduction.