Using their heads - A novel, collaborative approach between industry and scientists to monitor a commercial mullet fishery as a result of COVID-19 restrictions
The COVID-19 global pandemic-related restrictions during 2020 severely impacted the Australian seafood industry, including essential scientific monitoring to support stock assessment and to demonstrate sustainability. Here we detail a novel, collaborative monitoring program between scientists and the seafood industry to generate length and age compositions that were representative of one of the largest, most valuable, and controversial fisheries along eastern Australia, the pre-spawning ocean run fishery for Sea Mullet that is predominantly a roe fishery. The standard approach to monitoring this fishery has been to base trained scientific staff at the major processing facility for , where they access whole fish from entire catches to generate representative length and age compositions during the peak season, April to May. Covid-19 restrictions prevented this approach for 2020 in eastern Australia. In recognition that in addition to the high-value roe, all components of the female fish are utilized (heads and guts for bait, bodies for human consumption), a multi-stage, spatially stratified sampling design was investigated. Female heads were retained from randomly selected catches from each of the three major fishing zones and transported to the New South Wales Department of Primary Industries fish laboratory based in Sydney. Head lengths (HLs) were measured and converted to Fork Lengths (FLs) using a HL to FL relationship. The resulting fish length compositions from each catch were subsequently combined based on: (i) relative catch size of females within an ocean zone, and; (ii) the relative reported landings of females in each ocean fishing zone. Otoliths were randomly collected from heads sampled from each ocean zone and used to estimate age. The resulting ocean zone to age matrix was combined with the relative reported landings of female fish in each ocean fishing zone to generate a total female age composition for the fishery. The estimated age composition of females were typical in being mainly between ages 3 and 6, with a strong presence of 4-year olds. This stronger cohort was present as 3-year olds in 2018/19 and 5-year olds in 2020/21, thus providing confidence that our sampling was representative of the fishery. The study reinforces the positive outcomes that can be generated through co-management between scientists and the seafood industry.
Genetic Population Structure of Summer Flounder using Microsatellite DNA Analysis
Summer flounder supports one of the most valuable commercial and recreational fisheries along the Atlantic Coast of the U.S. However, in recent decades the management of this species has proven to be one of the most contentious for any exploited marine resource in the region. A coastwide catch quota is imposed annually for summer flounder of which 60% is allocated to the commercial fishery and 40% to the recreational fishery. The allocation is further divided among the individual coastal states from North Carolina to Massachusetts based on their landings in the 1980s. This process, based on political jurisdictions, does not consider the species' biological stock structure. Previous genetic studies (allozyme, mtDNA, and SNPs) provided contradictory results regarding the possible population structure of summer. To address this issue, we used DNA microsatellite analysis at 9 loci to define the coastwide population structure of summer flounder. In total, 1,182 specimens were analyzed from 18 collection sites. Most collections were from the continental shelf during the fall-winter spawning season. These were supplemented with additional samples from inshore waters from North Carolina to Florida, and inshore sites which support significant recreational fisheries at Nantucket Shoals, Massachusetts and Fire Island, New York. The overall level of genetic differentiation in pairwise comparison between collections was very low, mean = 0.001. There was no evidence of genetic differentiation between collections from north and south of Cape Hatteras. Our microsatellite results are consistent with an earlier SNP study which failed to find significant allelic heterogeneity among coastwide collections of summer flounder. However, a subset of pairwise comparisons between some collections proved statistically significant. Furthermore, in STRUCTURE analysis we found evidence of two genetic clusters within the species' northern landings area, however, this finding was not supported by DPAC analysis. We conclude that summer flounder most likely constitute a single population along their entire Atlantic Coast distribution.
Atlantic herring () population structure in the Northeast Atlantic Ocean
The Atlantic herring L has a vast geographical distribution and a complex population structure with a few very large migratory units and many small local populations. Each population has its own spawning ground and/or time, thereby maintaining their genetic integrity. Several herring populations migrate between common feeding grounds and over-wintering areas resulting in frequent mixing of populations. Thus, many herring fisheries are based on mixed populations of different demographic status. In order to avoid over-exploitation of weak populations and to conserve biodiversity, understanding the population structure and population mixing is important for maintaining biologically sustainable herring fisheries. The aim of this study was to investigate the genetic population structure of herring in the Faroese and surrounding waters, and to develop genetic markers for distinguishing between four herring management units (often called stocks), namely the Norwegian spring-spawning herring (NSSH), Icelandic summer-spawning herring (ISSH), North Sea autumn-spawning herring (NSAH), and Faroese autumn-spawning herring (FASH). Herring from the four stocks were sequenced at low coverage, and single nucleotide polymorphisms (SNPs) were called and used for population structure analysis and individual assignment. An ancestry-informative SNP panel with 118 SNPs was developed and tested on 240 individuals. The results showed that all four stocks appeared to be genetically differentiated populations, but at lower levels of differentiation between FASH and ISSH than the other two populations. Overall assignment rate with the SNP panel was 80.7%, and agreement between the genetic and traditional visual assignment was 75.5%. The NSAH and NSSH samples had the highest assignment rate (100% and 98.3%, respectively) and highest agreement between traditional and genetic assignment methods (96.6% and 94.9%, respectively). The FASH and ISSH samples had substantially lower assignment rates (72.9% and 51.7%, respectively) and agreement between traditional and genetic methods (39.5% and 48.4%, respectively).
COVID-19 restrictions and recreational fisheries in Ontario, Canada: Preliminary insights from an online angler survey
The COVID-19 pandemic and corresponding public health mitigation strategies have altered many facets of human life. And yet, little is known about how public health measures have impacted complex socio-ecological systems such as recreational fisheries. Using an online snowball survey, we targeted resident anglers in Ontario, Canada, to obtain preliminary insights on how the pandemic has impacted recreational fishing and related activity. We also explored angler perspectives on pandemic-related restrictions and other aspects of fisheries management. Our results point to the value of recreational fisheries for the mental and physical well-being of participants, as well as the value and popularity of outdoor recreation during a pandemic. Although angling effort and fish consumption appeared to decline during the early phases of the pandemic, approximately 21 % of the anglers who responded to our survey self-identified as new entrants who had begun or resumed fishing in that time. Self-reported motivations to fish during the pandemic suggest that free time, importance to mental and physical health, and desires for self-sufficiency caused some anglers to fish more, whereas a lack of free time, poor or uncertain accessibility, and perceived risks caused some anglers to fish less. Respondents also expressed their desires for more clear and consistent communication about COVID-19 fishing restrictions from governments, and viewed angling as a safe pandemic activity. Information on recreational angler behaviours, motivations, and perspectives during the pandemic may prove valuable to fisheries managers and policy makers looking to optimize their strategies for confronting this and other similar crises.
Small-scale fishing households facing COVID-19: The case of Lake Victoria, Kenya
Small-scale fisheries underpin the aquatic food supply, and are facing acute challenges in the wake of the COVID-19 pandemic. The study aimed to examine how small-scale fishing households, including fishers and fish traders, are responding to COVID-19 and associated movement restrictions around Lake Victoria, Kenya. We conducted phone interviews with 88 households in three riparian communities around Lake Victoria to examine shifts in fish consumption, fishing activities, price changes, and coping strategies. We found that households are consuming less fish, perceiving high fish prices, and coping by more often selling than eating fish. Most fishers and traders reported spending less time fishing and trading, and concern about being infected with COVID-19 was high. Our findings suggest movement restrictions and COVID-19 concern, along with high lake levels in the region, may limit fishing activities and fish access. Controlling COVID-19 and supporting opportunities for fishers and traders to safely return to their livelihood activities will be paramount to the recovery of small-scale fishing communities today. Our findings can also support planning to mitigate the impacts of future crises on small-scale fishing communities.
Correspondence between a recreational fishery index and ecological condition for U.S.A. streams and rivers
Sport fishing is an important recreational and economic activity, especially in Australia, Europe and North America, and the condition of sport fish populations is a key ecological indicator of water body condition for millions of anglers and the public. Despite its importance as an ecological indicator representing the status of sport fish populations, an index for measuring this ecosystem service has not been quantified by analyzing actual fish taxa, size and abundance data across the U.S.A. Therefore, we used game fish data collected from 1,561 stream and river sites located throughout the conterminous U.S.A. combined with specific fish species and size dollar weights to calculate site-specific recreational fishery index (RFI) scores. We then regressed those scores against 38 potential site-specific environmental predictor variables, as well as site-specific fish assemblage condition (multimetric index; MMI) scores based on entire fish assemblages, to determine the factors most associated with the RFI scores. We found weak correlations between RFI and MMI scores and weak to moderate correlations with environmental variables, which varied in importance with each of 9 ecoregions. We conclude that the RFI is a useful indicator of a stream ecosystem service, which should be of greater interest to the USA public and traditional fishery management agencies than are MMIs, which tend to be more useful for ecologists, environmentalists and environmental quality agencies.
Atlantic Coastwide Population Structure of Striped Bass Using Microsatellite DNA Analysis
Striped bass support one of the most popular and important inshore recreational and commercial fisheries along the Atlantic Coast of North America. Populations at both extremes of its distribution are largely resident while those in the center of its range (Hudson River, New York, to Roanoke River, North Carolina) are seasonally migratory, ranging from the Bay of Fundy, Canada, to the Outer Banks of North Carolina. Historically, population abundances of striped bass fluctuated widely, sometimes resulting in the imposition of severe management measures to restrict their harvest. Detailed knowledge of its rangewide population structure would aid in more effective management; however, most genetic studies addressing the structure of the migratory coastal stock have largely failed to achieve this goal. To address this need, we used multi-loci microsatellite DNA analysis. We identified six genetically distinct populations across the species' distribution, including the Miramichi, Shubenacadie, Hudson, Delaware-Chesapeake, Roanoke, and Santee-Cooper rivers. We also report significant genetic differentiation between the Nanticoke and Choptank rivers along the eastern shore of the Chesapeake Bay and collections from tributaries along the western shore of the Bay. The Annapolis and Saint John rivers, tributaries of the Bay of Fundy, historically hosted striped bass aggregations that were extirpated, or nearly so, by anthropogenic stressors in the late 20 century. No specimens with unique genotypes were found in collections from either river; instead the vast majority were admixed with genotypes of Shubenacadie River, Hudson River, Chesapeake Bay, and Roanoke River lineage. Finally, we show in simulations that these genetic markers should be informative in quantifying the contributions of the Hudson River, Chesapeake Bay-Delaware, and Roanoke River to mixed-stock harvests that occur within the range of the coastal migratory stock.
Characterising investments in EU fisheries and defining their desirability
In most economic sectors, increases in capital (i.e., investments) are often considered virtuous, indicating confidence in the future and expected growth. In fisheries, however, investments are often harmful, as they may lead to increases in fleet capacity, which is not desirable considering the fully exploited or overexploited status of most fish stocks (natural capital), and the dissipation of the resource rent (overcapitalisation). In the EU, the number of fishing vessels have been decreasing for many years, but the fishing capacity is often claimed to have increased. In other words, there are less vessels, but the remaining ones have a higher fishing capacity. In this study, we analyse the evolution of the EU fishing industry's investments for the period 2008-2016, and whether these investments have been beneficial. Results show that despite the overall decrease in the number of vessels and their average value, investments in some fleets have increased. Moreover, investment decisions (i.e., whether to invest or disinvest) have been more accurate in recent years, leading to a better economic performance. However, results vary by the scale of the fishing activity (small-scale and large scale fleets) and sea basin (Northeast Atlantic Ocean and Mediterranean Sea).
Developing a frame of reference for fisheries management and conservation interventions
Effective implementation of management interventions is often limited by uncertainty, particularly in small-scale and developing-world fisheries. An effective intervention must have a measurable benefit, and evaluation of this benefit requires an understanding of the historical and socio-ecological context in which the intervention takes place. This context or 'frame of reference' should include the baseline status of the species of interest, as well as the most likely counterfactual (a projected scenario indicating what would have occurred in the absence of the intervention), given recent trends. Although counterfactuals are difficult to estimate and so are not widely specified in practice, an informative frame of reference can be developed even in data-poor circumstances. We demonstrate this using a case study of the Bangladesh hilsa () fishery. We combine qualitative and some quantitative analyses of secondary datasets to explore ecological trends in the hilsa fishery, as well as patterns of social, economic, institutional, and physical change relevant to its management over the last ∼50 years. We compile all available information on the key parameters that determine hilsa abundance and distribution (movement, reproduction, growth, and mortality), as well as all available information on stock status. This information is used to produce a baseline and qualitative counterfactual which can be used to guide decision-making in this complex, data-poor fishery. A frame of reference provides a systematic way to break down potential drivers of change in a fishery, including their interactions, reducing the potential for unexpected management outcomes. Critical evaluation of contradictions and commonalities between a set of potential counterfactuals, as well as the reliability of sources, allows the identification of key areas of uncertainty and information needs. These can then be incorporated into fisheries management planning.
Evaluation of geostatistical estimators and their applicability to characterise the spatial patterns of recreational fishing catch rates
Western Australians are heavily engaged in recreational fishing activities with a participation rate of approximately 30%. An accurate estimation of the spatial distribution of recreational catch per unit effort (catch rates) is an integral component for monitoring fish population changes and to develop strategies for ecosystem-based marine management. Geostatistical techniques such as kriging can provide useful tools for characterising the spatial distributions of recreational catch rates. However, most recreational fishery data are highly skewed, zero-inflated and when expressed as ratios are impacted by the small number problem which can influence the estimates obtained from the traditional kriging. The applicability of ordinary, indicator and Poisson kriging to recreational catch rate data was evaluated for three aquatic species with different behaviours and distribution patterns. The prediction performance of each estimator was assessed based on cross-validation. For all three species, the accuracy plot of the indicator kriging (IK) showed a better agreement between expected and empirical proportions of catch rate data falling within probability intervals of increasing size, as measured by the goodness statistic. Also, indicator kriging was found to be better in predicting the latent catch rate for the three species compared to ordinary and Poisson kriging. For each species, the spatial maps from the three estimators displayed similar patterns but Poisson kriging produced smoother spatial distributions. We show that the IK estimator may be preferable for the spatial modelling of catch rate data exhibiting these characteristics, and has the best prediction performance regardless of the life history and distribution patterns of those three species.